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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mrps16, mitochondrial ribosomal protein S16
Sequence ID:NM_025440
Entrez Gene ID:66242
Ensembl ID:ENSMUSG00000049960

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 B|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 20391307 - 20393613

NM_025440 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12302121045221210681
2314912121111421211374
4925662121270221212776

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3986314Full LengthBC024656mitochondrial ribosomal protein S16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079716  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025440 NP_079716 Q9CPX7 Ribosomal_S16

Related Sequences

 
mRNAGenPeptSwissProt
BC024656 AAH24656 Q9CPX7
AK005206 BAB23884 Q9CPX7
AK019243 BAB31623 Q9CPX7
AB049949 BAB41002 Q9CPX7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mrps16 NP_079716 R.norvegicus Mrps16 688912   NP_001102988 94
H.sapiens MRPS16 51021 Gene Info NP_057149 91
D.melanogaster mRpS16 36570   NP_523737 51
C.elegans F56D1.3 3565469   NP_001022207 47
A.gambiae AgaP_AGAP004818 1278408   XP_317991 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)