Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Elfn1, leucine rich repeat and fibronectin type III, extracellular 1
Sequence ID:NM_175522
Entrez Gene ID:243312
Ensembl ID:ENSMUSG00000048988

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 139972850 - 139974706

NM_175522 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
187140383896140383982
883832140446931140450675

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6811341Full LengthBC059029leucine rich repeat and fibronectin type III, extracellular 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780731  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175522 NP_780731 Q8C8T7 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC059029 AAH59029 Q8C8T7
AK044053 BAC31755 Q8BRK3
AK044511 BAC31957 Q8C8T7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Elfn1 NP_780731 R.norvegicus Elfn1 288512   NP_001099383 99
H.sapiens ELFN1 392617 Gene Info NP_001122108 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)