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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Prtn3, proteinase 3
Sequence ID:NM_011178
Entrez Gene ID:19152
Ensembl ID:ENSMUSG00000057729

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10 43.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 79880979 - 79883172

NM_011178 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1767934241179342486
772427934317279343337
2433847934378079343921
3856157934467979344909
6169707934556279345916

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015718Full LengthBC148715proteinase 3
100014705BC141456proteinase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035308  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011178 NP_035308   Trypsin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U97073 AAB58055 Q61096 EC 3.4.21.76
U43525 AAB67271 Q61096 EC 3.4.21.76
BC141456 AAI41457    
BC148715 AAI48716    
FM210470 CAR66081 B6ZCE5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prtn3 NP_035308 R.norvegicus Prtn3 314615   NP_001019435 93
H.sapiens PRTN3 5657 Gene Info NP_002768 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)