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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Taf7, TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Sequence ID:NM_175770
Entrez Gene ID:24074
Ensembl ID:ENSMUSG00000051316

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B3|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 37642021 - 37644147

NM_175770 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
130423780014437803185
304333023780359837803857

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5373242Full LengthBC029673TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_786964  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175770 NP_786964 Q9R1C0 TAFII55_N

Related Sequences

 
mRNAGenPeptSwissProt
AF144562 AAD46767 Q9R1C0
BC029673 AAH29673 Q9R1C0
AK029380 BAC26429 Q9R1C0
AK075700 BAC35898 Q8BPH4
AK076362 BAC36313 Q9R1C0
AK089054 BAC40723 Q8C291

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Taf7 NP_786964 R.norvegicus Taf7 307485   NP_001100864 99
H.sapiens TAF7 6879 Gene Info NP_005633 95
A.gambiae AgaP_AGAP010493 1275232   XP_314467 50
D.melanogaster Taf7 40934   NP_649748 43
C.elegans taf-7.2 176686   NP_499647 42
C.elegans taf-7.1 192053   NP_509976 38
N.crassa NCU03095 3880014   XP_963865 38
S.pombe ptr6 2542822   NP_593650 35
S.cerevisiae TAF7 855267   NP_013954 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)