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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Wasf2, WAS protein family, member 2
Sequence ID:NM_153423
Entrez Gene ID:242687
Ensembl ID:ENSMUSG00000028868

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.3|4 65.7 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 133197259 - 133199725

NM_153423 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
196132686547132686642
97268132732355132732526
269403132740883132741017
404557132741513132741666
558675132744992132745109
676806132746043132746173
807962132748019132748174
9631474132750310132750821
14754088132751631132754244

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063274Full LengthBC157065WAS protein family, member 2
1378735IncompleteBC051488WAS protein family, member 2
5353701IncompleteBC030464WAS protein family, member 2
100061709BC156285WAS protein family, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_700472  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153423 NP_700472 Q8BH43 WH2

Related Sequences

 
mRNAGenPeptSwissProt
BC051488 AAH51488 Q80UQ8
BC156285 AAI56286  
BC157065 AAI57066  
AY135643 AAN10152 Q8BH43
AK035717 BAC29165 Q8BZD7
AK085458 BAC39451 Q8BH43
AK154802 BAE32839 Q3U3E7
AK172187 BAE42873 Q3T9Z7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Wasf2 NP_700472 R.norvegicus Wasf2 313024   NP_001013185 97
H.sapiens WASF2 10163 Gene Info NP_008921 92
C.elegans wve-1 187639   NP_493028 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta