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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Esrrb, estrogen related receptor, beta
Sequence ID:NM_001159500
NM_011934
Entrez Gene ID:26380
Ensembl ID:ENSMUSG00000021255

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 D2|12 41.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 86421836 - 86521625

 Exon Info From UCSC:
NM_001159500
NM_011934

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130872Full LengthBC132595estrogen related receptor, beta
40130874Full LengthBC132597estrogen related receptor, beta
5368892IncompleteBC044858estrogen related receptor, beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036064  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159500 NP_001152972    
NM_011934 NP_036064   Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
S82458 AAB37687 Q61539
BC044858 AAH44858 Q80VS1
BC132595 AAI32596 Q61539
BC132597 AAI32598 Q61539
AK032025 BAC27656 Q8CCV5
AK052256 BAC34898 Q61539
X89594 CAA61755 Q61539

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Esrrb NP_036064 R.norvegicus Esrrb 299210   NP_001008516 96
H.sapiens ESRRB 2103 Gene Info NP_004443 93
A.gambiae AgaP_AGAP001743 1281432   XP_321343 52
D.melanogaster ERR 38912   NP_648183 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)