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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Spg20, spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
Sequence ID:NM_001144987
NM_001144988
NM_144895
Entrez Gene ID:229285
Ensembl ID:ENSMUSG00000036580

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 C|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 55117326 - 55137318

 Exon Info From UCSC:
NM_001144987
NM_001144988
NM_144895

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4220506Full LengthBC022921spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001144987 NP_001138459    
NM_001144988 NP_001138460    
NM_144895 NP_659144 Q3TVW1
Q8R1X6
 

Related Sequences

 
mRNAGenPeptSwissProt
BC022921 AAH22921 Q3TVW1
Q8R1X6
AK035081 BAC28937 Q8R1X6
AK036569 BAC29482 Q8R1X6
AK087388 BAC39856 Q8R1X6
AK129171 BAC97981 Q8R1X6
AK159951 BAE35507 Q3TVW1
Q8R1X6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Spg20 NP_001138460 H.sapiens SPG20 23111 Gene Info NP_001135766 88
R.norvegicus Spg20 295053   NP_001099903 88
C.elegans F57B10.9 172369   NP_491888 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)