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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mmp25, matrix metallopeptidase 25
Sequence ID:NM_001033339
Entrez Gene ID:240047
Ensembl ID:ENSMUSG00000023903

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 23630088 - 23645009

NM_001033339 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113792376642423767802
138016372376797223768229
163817902376830923768461
179118732376875723768839
187419582376951523769599
195921352376970023769876
213624252377671923777008
242625612377710523777240
256226942378100523781137
269533732378155723782235

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40059601Full LengthBC112379matrix metallopeptidase 25
6822049IncompleteBC059059matrix metallopeptidase 25

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033339 NP_001028511 Q3U435  

Related Sequences

 
mRNAGenPeptSwissProt
BC112379 AAI12380 Q3U435
AK154458 BAE32600 Q3U435

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mmp25 NP_001028511 R.norvegicus Mmp25 302963   XP_002742480 81
H.sapiens MMP25 64386 Gene Info NP_071913 76
A.gambiae AgaP_AGAP003929 3290935   XP_554330 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)