Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ranbp1, RAN binding protein 1
Sequence ID:NM_011239
Entrez Gene ID:19385
Ensembl ID:ENSMUSG00000005732

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, limb, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A3|16 10.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 18239784 - 18248658

NM_011239 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12151824007118240285
2162811824098618241051
2824101824183718241965
4115681824529318245450
5697051824738118247517
7068521824864018248786

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6775220Full LengthBC061140RAN binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035369  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011239 NP_035369 P34022 Ran_BP1

Related Sequences

 
mRNAGenPeptSwissProt
L25255 AAA16195 P34022
BC061140 AAH61140 P34022
AK002989 BAB22501 P34022
AK008276 BAB25569 P34022
AK088781 BAC40569 P34022
AK151167 BAE30170 P34022
AK153074 BAE31699 Q3U6M5
AK166642 BAE38911 P34022
AK167053 BAE39217 P34022
X56045 CAA39516 P34022
X56046 CAA39517 P34022

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ranbp1 NP_035369 R.norvegicus Ranbp1 360739   NP_001101794 99
H.sapiens RANBP1 5902 Gene Info NP_002873 95
N.crassa NCU00443 3872845   XP_956707 57
S.pombe sbp1 2540142   NP_595122 56
S.cerevisiae YRB1 851565   NP_010285 53
P.falciparum PFD0950w 812489   XP_001351504 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta