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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Zfp36l1, zinc finger protein 36, C3H type-like 1
Sequence ID:NM_007564
Entrez Gene ID:12192
Ensembl ID:ENSMUSG00000021127

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C3|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 80112072 - 80113013

NM_007564 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
127898120874681211534
279029848121380581213999

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3157001Full LengthBC016621zinc finger protein 36, C3H type-like 1
5257866IncompleteBC037998zinc finger protein 36, C3H type-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031590  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007564 NP_031590 Q543H2
P23950
zf-CCCH
Tis11B_N

Related Sequences

 
mRNAGenPeptSwissProt
M58566 AAA72948 Q543H2
P23950
BC016621 AAH16621 Q91YI7
AK036950 BAC29648 Q543H2
P23950
AK051035 BAC34506 Q543H2
P23950

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Zfp36l1 NP_031590 R.norvegicus Zfp36l1 29344   NP_058868 100
H.sapiens ZFP36L1 677 Gene Info NP_004917 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)