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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cadm1, cell adhesion molecule 1
Sequence ID:NM_001025600
NM_018770
NM_207675
NM_207676
Entrez Gene ID:54725
Ensembl ID:ENSMUSG00000032076

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 B-C

Chromosomal Position (from UCSC)

Chromosomal Position:9: 47797423 - 47850390

 Exon Info From UCSC:
NM_001025600
NM_018770
NM_207675
NM_207676

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5372277Full LengthBC095986cell adhesion molecule 1
6414884Full LengthBC057125cell adhesion molecule 1
6703838Full LengthBC090970cell adhesion molecule 1
5008124IncompleteBC069937immunoglobulin superfamily, member 4A
5705843IncompleteBC094661cell adhesion molecule 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020771  NP_997558  NP_061240  NP_997559  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025600 NP_001020771   ig
V-set
C2-set_2
NM_018770 NP_061240   ig
V-set
C2-set_2
NM_207675 NP_997558 Q8R5M8 ig
I-set
V-set
C2-set_2
NM_207676 NP_997559   ig
V-set
C2-set_2

Related Sequences

 
mRNAGenPeptSwissProt
AF061260 AAC67243 Q8R5M8
BC057125 AAH57125  
BC090970 AAH90970  
BC094661 AAH94661  
BC095986 AAH95986  
AF434663 AAL86736 Q8R5M8
AF539424 AAN01614 Q8R5M8
AY351388 AAQ02381 Q8R5M8
DQ279856 ABB86959 Q1WIL9
EU541474 ACD67901 B5L830
EU541475 ACD67902 B5L831
EU541476 ACD67903 B5L832
EU541477 ACD67904 B5L833
JQ782219 AFQ36773 E9PYN1
AB021964 BAA87914 Q8R5M8
AB021965 BAA87915 Q8R5M8
AB021966 BAA87916 Q9QYL4
AB021967 BAA87917 Q9QYL3
AB052293 BAB60686  
AB064265 BAB83501 Q8R5M8
AB092414 BAC66173 Q8R5M8
AB183399 BAD30018 Q8R5M8
AB183400 BAD30019 Q8R5M8
AB183401 BAD30020 Q8R5M8
AB183402 BAD30021 Q8R5M8
AB377192 BAG06228  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cadm1 NP_997558 H.sapiens CADM1 23705 Gene Info NP_055148 99
R.norvegicus Cadm1 363058   NP_001012201 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)