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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc11a2, solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
Sequence ID:NM_001146161
NM_008732
Entrez Gene ID:18174
Ensembl ID:ENSMUSG00000023030

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F1|15 59.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 100394703 - 100422992

 Exon Info From UCSC:
NM_001146161
NM_008732

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5040976Full LengthBC019137solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032758  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001146161 NP_001139633    
NM_008732 NP_032758 P49282 Nramp

Related Sequences

 
mRNAGenPeptSwissProt
AF029758 AAC24496 P49282
L33415 AAC42051 P49282
BC019137 AAH19137 P49282
BC147350 AAI47351 Q3TR11
BC147351 AAI47352 Q3TR11
AK049856 BAC33960 P49282
AK083478 BAC38930 P49282
AK148276 BAE28454 P49282
AK163173 BAE37220 Q3TR11
AJ493663 CAD38518 P49282

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc11a2 NP_032758 R.norvegicus Slc11a2 25715   NP_037305 98
H.sapiens SLC11A2 4891 Gene Info NP_001167596 92
D.melanogaster Mvl 42490   NP_001163668 62
C.elegans smf-1 180939   NP_001024792 60
C.elegans smf-3 177044   NP_500235 57
C.elegans smf-2 191766   NP_509131 56
A.gambiae AgaP_AGAP012464 1275957   XP_315254 53
A.thaliana NRAMP3 816847   NP_179896 52
A.thaliana NRAMP4 836868   NP_201534 52
A.thaliana NRAMP2 841127   NP_175157 52
S.cerevisiae SMF2 856447   NP_011917 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)