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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Myo1c, myosin IC
Sequence ID:NM_001080774
NM_001080775
NM_008659
Entrez Gene ID:17913
Ensembl ID:ENSMUSG00000017774

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C-E1|11 44.13 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 75651579 - 75674632

 Exon Info From UCSC:
NM_001080774
NM_001080775
NM_008659

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5344331Full LengthBC021481myosin IC

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032685  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080774 NP_001074243    
NM_001080775 NP_001074244    
NM_008659 NP_032685 Q9WTI7 Myosin_head
IQ
Myosin_TH1

Related Sequences

 
mRNAGenPeptSwissProt
U96723 AAC53264 Q9WTI7
AY007255 AAG02570 Q9WTI7
BC021481 AAH21481 Q9WTI7
AK004743 BAB23524 Q9WTI7
AK154294 BAE32495 Q9WTI7
AK155530 BAE33311 Q9WTI7
AK171107 BAE42253 Q9WTI7
X99638 CAA67956 Q9WTI7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Myo1c NP_001074244 R.norvegicus Myo1c 65261   NP_075580 99
H.sapiens MYO1C 4641 Gene Info NP_001074248 97
D.melanogaster Myo61F 38153   NP_728594 52
P.falciparum MyoA 814200   XP_001350147 32
P.falciparum PFE0175c 812923   XP_001351594 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)