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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pou4f2, POU domain, class 4, transcription factor 2
Sequence ID:NM_138944
Entrez Gene ID:18997
Ensembl ID:ENSMUSG00000031688

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 78433010 - 78436647

NM_138944 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
126708095690780959576
267132128096000980960550

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062754Full LengthBC156891POU domain, class 4, transcription factor 2
100063064BC156470POU domain, class 4, transcription factor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620394  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138944 NP_620394 Q63934 Homeobox
Pou

Related Sequences

 
mRNAGenPeptSwissProt
S68377 AAC60672 Q63934
BC156470 AAI56471  
BC156891 AAI56892  
AK087546 BAC39921 Q63934
Z29629 CAA82736 Q62091

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pou4f2 NP_620394 R.norvegicus Pou4f2 171355   NP_599182 100
H.sapiens POU4F2 5458 Gene Info NP_004566 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)