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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smc5, structural maintenance of chromosomes 5
Sequence ID:NM_001252684
NM_001252685
NM_153808
Entrez Gene ID:226026
Ensembl ID:ENSMUSG00000024943

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 B|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 23208827 - 23273818


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3493165Full LengthBC007174structural maintenance of chromosomes 5
3596405Full LengthBC038345structural maintenance of chromosomes 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_722503  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252684 NP_001239613 Q8CG46  
NM_001252685 NP_001239614    
NM_153808 NP_722503   SMC_N

Related Sequences

 
mRNAGenPeptSwissProt
BC007174 AAH07174 Q8CG46
BC038345 AAH38345 Q8CG46
AK122321 BAC65603 Q8CG46
AJ534941 CAD59184 Q8CG46

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smc5 NP_722503 R.norvegicus Smc5 293967   NP_001099827 97
H.sapiens SMC5 23137 Gene Info NP_055925 90
A.thaliana SMC5 831449   NP_197096 33
S.cerevisiae SMC5 854123   NP_014608 31
A.gambiae AgaP_AGAP011623 1281007   XP_320881 30
S.pombe smc5 2541587   NP_594907 30
N.crassa NCU09065 3879942   XP_963793 30
D.melanogaster Smc5 326215   NP_996141 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)