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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cpt1c, carnitine palmitoyltransferase 1c
Sequence ID:NM_001252470
NM_153679
Entrez Gene ID:78070
Ensembl ID:ENSMUSG00000007783

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B2|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 44959372 - 44974774


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30089333Full LengthBC066155carnitine palmitoyltransferase 1c

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_710146  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001252470 NP_001239399      
NM_153679 NP_710146 Q8BGD5 EC 2.3.1.21 Carn_acyltransf

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC043460 AAH43460 Q80UY0  
BC066155 AAH66155 Q6NZF8  
AF320000 AAN39013 Q8BGD5 EC 2.3.1.21
AF320000 AAN39014 Q8CFB9  
AK035790 BAC29187 Q8BGD5 EC 2.3.1.21

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cpt1c NP_710146 R.norvegicus Cpt1c 308579   NP_001030097 93
H.sapiens CPT1C 126129 Gene Info NP_689572 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)