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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rrp8, ribosomal RNA processing 8, methyltransferase, homolog (yeast)
Sequence ID:NM_025897
NM_133951
Entrez Gene ID:101867
Ensembl ID:ENSMUSG00000030888

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 E3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 105732208 - 105736500

Transcript StartTranscript EndChromosomal Start Chromosomal End
1935112880722112881656
9361032112881865112881961
10331139112882045112882151
11401269112882281112882410
12701723112882513112882966
17242090112883203112883569
20912293112884811112885013

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4242458Full LengthBC022923RIKEN cDNA 1500003O22 gene
6403599Full LengthBC046799RIKEN cDNA 1500003O22 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080173  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025897 NP_080173 Q9DB85 Methyltransf_8
NM_133951 NP_598712    

Related Sequences

 
mRNAGenPeptSwissProt
BC022923 AAH22923 Q9DB85
BC046799 AAH46799 Q9DB85
AK005138 BAB23836 Q9DB85
AK045361 BAC32326 Q9DB85
AK077786 BAC37008 Q9DB85
AK154337 BAE32523 Q3U4B0
AK154858 BAE32883 Q9DB85
AK170257 BAE41665 Q9DB85
AK172189 BAE42874 Q9DB85
AK172224 BAE42891 Q9DB85

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rrp8 NP_080173 R.norvegicus Rrp8 308911   NP_001008347 92
H.sapiens RRP8 23378 Gene Info NP_056139 76
A.gambiae AgaP_AGAP011327 1270610   XP_309322 45
A.thaliana AT5G40530 834051   NP_198869 44
S.pombe rrp8 2543219   NP_593223 44
S.cerevisiae RRP8 851656   NP_010368 41
C.elegans T07A9.8 176864   NP_499920 40
D.melanogaster CG7137 37204   NP_611400 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)