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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chrac1, chromatin accessibility complex 1
Sequence ID:NM_053068
Entrez Gene ID:93696
Ensembl ID:ENSMUSG00000068391

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 E1

Chromosomal Position (from UCSC)

Chromosomal Position:15: 73090436 - 73093639

NM_053068 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11727292084172921012
1732997292326272923388
3008517292395372924504

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6773451Full LengthBC061043chromatin accessibility complex 1
2812195IncompleteBC016593chromatin accessibility complex 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444298  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053068 NP_444298 Q9JKP8 CBFD_NFYB_HMF
NM_153178 NP_694818 Q8CJG0 PAZ
Piwi

Related Sequences

 
mRNAGenPeptSwissProt
AF230805 AAF67145 Q9JKP8
BC016593 AAH16593 Q9JKP8
BC024857 AAH24857 Q8R3Q7
BC056639 AAH56639 Q6PHA2
BC061043 AAH61043 Q9JKP8
BC064741 AAH64741 Q6P239
BC096465 AAH96465 Q8CJG0
BC128379 AAI28380 Q8CJG0
BC129922 AAI29923 Q8CJG0
AK010812 BAB27197 Q9JKP8
AB081472 BAC15767 Q8CJG0
AK220193 BAD90378 Q8CJG0
AK142854 BAE25210 Q3UQ34

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chrac1 NP_444298 R.norvegicus Chrac1 315058   NP_001128352 93
H.sapiens CHRAC1 54108 Gene Info NP_059140 83
A.gambiae AgaP_AGAP007481 1269743   XP_308392 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)