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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tfeb, Transcription factor EB
Sequence ID:NM_001161722
NM_001161723
NM_011549
Entrez Gene ID:21425
Ensembl ID:ENSMUSG00000023990

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 D|17 26.0

Chromosomal Position (from UCSC)

Chromosomal Position:17: 47785764 - 47791912

 Exon Info From UCSC:
NM_001161722
NM_001161723
NM_011549

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30429545Full LengthBC064789transcription factor EB

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035679  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161722 NP_001155194 Q9R210  
NM_001161723 NP_001155195    
NM_011549 NP_035679 Q6P203 HLH

Related Sequences

 
mRNAGenPeptSwissProt
U36393 AAA79697 Q60982
AF079095 AAD20979 Q9R210
Q3UKG7
BC064789 AAH64789 Q6P203
AK078755 BAC37377 Q8C5F1
AK146016 BAE26834 Q3UKG7
AK154971 BAE32963 Q3U327

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tfeb NP_035679 R.norvegicus Tfeb 316214   NP_001020878 97
H.sapiens TFEB 7942 Gene Info NP_001161299 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)