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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc39a5, solute carrier family 39 (metal ion transporter), member 5
Sequence ID:NM_001136237
NM_028051
NM_028092
Entrez Gene ID:72002
Ensembl ID:ENSMUSG00000039878

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D3|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 128395933 - 128400466

 Exon Info From UCSC:
NM_001136237
NM_028051
NM_028092

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5041383Full LengthBC028990solute carrier family 39 (metal ion transporter), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082368  NP_082327  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001136237 NP_001129709    
NM_028051 NP_082327   Zip
NM_028092 NP_082368 Q9D856 Zip

Related Sequences

 
mRNAGenPeptSwissProt
BC028990 AAH28990 Q9D856
AK007473 BAB25054 Q9D856
AK008448 BAB25675 Q9D856

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc39a5 NP_001129709 R.norvegicus Slc39a5 362812   NP_001102198 94
H.sapiens SLC39A5 283375 Gene Info NP_001128667 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)