Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tfam, transcription factor A, mitochondrial
Sequence ID:NM_009360
Entrez Gene ID:21780
Ensembl ID:ENSMUSG00000003923

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B5|10 38.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 71227938 - 71238039

NM_009360 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
132237068822470691446
322432807069183470691890
328133767069610470696199
337735267069761270697761
352735977069829070698360
359837137069966370699778
371439187070058770700791

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3487433Full LengthBC001987transcription factor A, mitochondrial
6514962Full LengthBC083084transcription factor A, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033386  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009360 NP_033386 P40630 HMG_box

Related Sequences

 
mRNAGenPeptSwissProt
L07107 AAA02579 P40630
U63712 AAB06394 P97907
U57939 AAC52815 P40630
U63858 AAC52816 P40630
BC001987 AAH01987 P40630
BC083084 AAH83084 P40630
AK050446 BAC34258 P40630
AK161747 BAE36556 Q3TSW9
AK167348 BAE39447 P40630
AK167777 BAE39809 P40630
AK169808 BAE41382 P40630

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tfam NP_033386 R.norvegicus Tfam 83474   NP_112616 90
H.sapiens TFAM 7019 Gene Info NP_003192 64
A.gambiae AgaP_AGAP008499 1277472   XP_316944 31
D.melanogaster TFAM 42433   NP_524415 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)