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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Shoc2, soc-2 (suppressor of clear) homolog (C. elegans)
Sequence ID:NM_001168505
NM_019658
Entrez Gene ID:56392
Ensembl ID:ENSMUSG00000024976

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 D2|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 53987680 - 54031276

 Exon Info From UCSC:
NM_001168505
NM_019658

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4014650Full LengthBC026364soc-2 (suppressor of clear) homolog (C. elegans)
5356514Full LengthBC083060soc-2 (suppressor of clear) homolog (C. elegans)
6515905Full LengthBC049775soc-2 (suppressor of clear) homolog (C. elegans)
3481663IncompleteBC013722soc-2 (suppressor of clear) homolog (C. elegans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062632  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168505 NP_001161977    
NM_019658 NP_062632 O88520 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
AF068921 AAC40175 O88520
BC013722 AAH13722 O88520
BC026364 AAH26364 Q8R378
BC049775 AAH49775 O88520
BC083060 AAH83060 O88520
AK146447 BAE27179 O88520

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Shoc2 NP_001161977 R.norvegicus Shoc2 309548   NP_001013173 98
H.sapiens SHOC2 8036 Gene Info NP_031399 98
D.melanogaster Sur-8 42093   NP_732231 62
C.elegans soc-2 177286   NP_741391 58
A.gambiae AgaP_AGAP004485 1274632   XP_313783 55
A.thaliana GSO1 827760   NP_193747 34
A.thaliana GSO2 834499   NP_199283 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)