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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cobl, cordon-bleu
Sequence ID:NM_172496
Entrez Gene ID:12808
Ensembl ID:ENSMUSG00000020173

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A1|11 6.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 12236607 - 12464804

 Exon Info From UCSC:
NM_172496

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053666Full LengthBC145118cordon-bleu
9087617Full LengthBC150706cordon-bleu
3990081IncompleteBC023264cordon-bleu
5698639IncompleteBC060061cordon-bleu

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766084  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172496 NP_766084 Q5NBX1 WH2

Related Sequences

 
mRNAGenPeptSwissProt
U26967 AAA92362 Q5NBX1
BC023264 AAH23264 Q5NBX1
BC060061 AAH60061 Q5NBX1
BC145118 AAI45119 B2RWU4
BC150706 AAI50707 B2RWU4
AY308745 AAP74341 Q5NBX1
AK028833 BAC26144 Q5NBX1
AK049730 BAC33896 Q5NBX1
AK122334 BAC65616 Q5NBX1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cobl NP_766084 R.norvegicus Cobl 305497   NP_001100706 88
H.sapiens COBL 23242 Gene Info NP_056013 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)