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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cryba1, crystallin, beta A1
Sequence ID:NM_009965
Entrez Gene ID:12957
Ensembl ID:ENSMUSG00000000724

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B-C1|11 44.71 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 77718731 - 77725293

NM_009965 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11717753223377532403
1723147753288977533031
3154567753439077534531
4575757753611077536228
5766407753705177537115
6416837753875277538794

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40055280Full LengthBC107342crystallin, beta A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034095  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009965 NP_034095 Q9QXC6 Crystall

Related Sequences

 
mRNAGenPeptSwissProt
M21473 AAA51628 Q61445
J00378 AAA51629 P02525
BC107342 AAI07343 Q9QXC6
AK084145 BAC39126 Q8BNB5
V00728 CAA24106 P02525
AJ239052 CAB52418 Q9QXC6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cryba1 NP_034095 R.norvegicus Cryba1 25583   XP_340847 98
H.sapiens CRYBA1 1411 Gene Info NP_005199 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)