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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cpt1b, carnitine palmitoyltransferase 1b, muscle
Sequence ID:NM_009948
Entrez Gene ID:12895
Ensembl ID:ENSMUSG00000078937

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E3|15 52.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 89416404 - 89425347

 Exon Info From UCSC:
NM_009948

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4920625Full LengthBC018270carnitine palmitoyltransferase 1b, muscle

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034078  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009948 NP_034078 Q924X2 EC 2.3.1.21 Carn_acyltransf

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF017174 AAC31640 Q924X2 EC 2.3.1.21
BC018270 AAH18270 Q924X2 EC 2.3.1.21
AB010826 BAA88685 Q924X2 EC 2.3.1.21
AK146851 BAE27481 Q3UIM5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cpt1b NP_034078 R.norvegicus Cpt1b 25756   NP_037332 95
H.sapiens CPT1B 1375 Gene Info NP_001138607 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)