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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Atp2a2, ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
Sequence ID:NM_001110140
Entrez Gene ID:11938
Ensembl ID:ENSMUSG00000029467

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 65.0

Chromosomal Position (from UCSC)

Chromosomal Position:5: 122460916 - 122489376

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6406916Full LengthBC054531ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
6406916Full LengthBC054748ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
4503461IncompleteBC037029ATPase, Ca++ transporting, cardiac muscle, slow twitch 2

Protein Infomation

NM_001110140 NP_001103610 O55143 EC  
NM_009722 NP_033852      

Related Sequences

AF039893 AAB96672 O54994  
BC054531 AAH54531 O55143 EC
BC054748 AAH54748 O55143 EC
AK220538 BAD90532 Q5DTI2  
AJ223584 CAA11450 O55143 EC
AJ131821 CAB72436 O55143 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Atp2a2 NP_001103610 R.norvegicus Atp2a2 29693   NP_001104293 100
H.sapiens ATP2A2 488 Gene Info NP_733765 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)