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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pvr, poliovirus receptor
Sequence ID:NM_027514
Entrez Gene ID:52118
Ensembl ID:ENSMUSG00000040511

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7 4.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 19903577 - 19921100

NM_027514 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1716292048892820490540
163016642049112720491161
166517872049452920494651
178819392049595320496104
194020662050008620500212
206723632050222220502518
236427112050391020504257
271229022050630120506491

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4188634Full LengthBC013673poliovirus receptor
5363187Full LengthBC032283poliovirus receptor
8861238Full LengthBC138219poliovirus receptor
8861239Full LengthBC138220poliovirus receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081790  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027514 NP_081790 Q8K094 V-set
C2-set_2

Related Sequences

 
mRNAGenPeptSwissProt
U35836 AAB17502 Q60977
BC013673 AAH13673 Q91WP1
BC032283 AAH32283 Q8K094
BC138219 AAI38220 Q8K094
BC138220 AAI38221 Q8K094
AK038747 BAC30124 Q8K094
AK078344 BAC37229 Q8BVF6
AK080753 BAC38008 Q8K094
AB195430 BAD90661 Q91WP1
AK165873 BAE38429 Q8K094
AJ563420 CAD91411 Q8K094

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pvr NP_081790 R.norvegicus PVR 25066   NP_058772 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)