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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Itgav, integrin alpha V
Sequence ID:NM_008402
Entrez Gene ID:16410
Ensembl ID:ENSMUSG00000027087

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 D|2 46.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 83805541 - 83806913

 Exon Info From UCSC:
NM_008402

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068082Full LengthBC167182integrin alpha V
5362788IncompleteBC048857integrin alpha V

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032428  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008402 NP_032428 P43406 Integrin_alpha
FG-GAP
Integrin_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
U14135 AAC52497 P43406
BC048857 AAH48857 Q80Y67
BC167182 AAI67182 P43406
AK154307 BAE32504 Q3U4C8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itgav NP_032428 R.norvegicus Itgav 296456   NP_001100019 98
H.sapiens ITGAV 3685 Gene Info NP_002201 93
A.gambiae AgaP_AGAP000032 1272247   XP_311131 36
D.melanogaster if 32661   NP_001162777 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta