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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nr1h3, nuclear receptor subfamily 1, group H, member 3
Sequence ID:NM_001177730
NM_013839
Entrez Gene ID:22259
Ensembl ID:ENSMUSG00000002108

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E1|2 40.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 91184092 - 91195011

 Exon Info From UCSC:
NM_001177730
NM_013839

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4163109Full LengthBC012646nuclear receptor subfamily 1, group H, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038867  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177730 NP_001171201    
NM_013839 NP_038867 Q9Z0Y9 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
AF085745 AAD16050 Q9Z0Y9
Q91X41
BC012646 AAH12646 Q91X41
AY195870 AAO45091 Q91X41
AY195871 AAO45092 Q91X41
AK143904 BAE25593 Q91X41
AK159250 BAE34931 Q91X41
AJ132601 CAB51923 Q9Z0Y9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nr1h3 NP_001171201 R.norvegicus Nr1h3 58852   NP_113815 98
H.sapiens NR1H3 10062 Gene Info NP_005684 92
D.melanogaster EcR 35540   NP_724456 46
A.gambiae AgaP_AGAP012211 1280477   XP_320323 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta