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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Krt10, keratin 10
Sequence ID:NM_010660
Entrez Gene ID:16661
Ensembl ID:ENSMUSG00000019761

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 57.95 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 99385260 - 99389361

NM_010660 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
324139924656899246949
4147529924724499247582
7539709924784499248061
97110969924831199248436
109712589924854399248704
125914159924881199248967
141614989924932399249405
149921249925005299250677

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069493Full LengthBC172685keratin 10
100063170BC156547keratin 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034790  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010660 NP_034790   Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC156547 AAI56548  
BC172685 AAI72685  
AK014360 BAB29296 P02535
AK076508 BAC36371 P02535
AK081402 BAC38210 P02535
AK081914 BAC38369 P02535
V00830 CAA24214 P02535

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Krt10 NP_034790 R.norvegicus Krt10 450225   NP_001008804 93
H.sapiens KRT10 3858 Gene Info NP_000412 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)