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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Wdtc1, WD and tetratricopeptide repeats 1
Sequence ID:NM_199306
Entrez Gene ID:230796
Ensembl ID:ENSMUSG00000037622

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 133294026 - 133353481

 Exon Info From UCSC:
NM_199306

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4188979Full LengthBC048824WD and tetratricopeptide repeats 1
5099225Full LengthBC034833WD and tetratricopeptide repeats 1
5697877Full LengthBC057107WD and tetratricopeptide repeats 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_955010  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_199306 NP_955010 Q80ZK9 WD40
TPR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC034833 AAH34833 Q8JZZ2
BC048824 AAH48824 Q80ZK9
BC057107 AAH57107 Q80ZK9
AK162402 BAE36896 Q3TRY0
XM_001477989 XP_001478039  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Wdtc1 NP_955010 R.norvegicus Wdtc1 313020   NP_001101378 100
H.sapiens WDTC1 23038 Gene Info NP_055838 97
A.gambiae AgaP_AGAP003346 1275024   XP_314246 45
A.gambiae AgaP_AGAP012877 3292573   XP_561157 41
D.melanogaster adp 37073   NP_611296 41
A.thaliana AT5G10940 830961   NP_568242 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)