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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. P4htm, prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
Sequence ID:NM_028944
Entrez Gene ID:74443
Ensembl ID:ENSMUSG00000006675

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F2|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 108578882 - 108597571

NM_028944 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1483108481156108481638
484607108482046108482169
608698108482346108482436
699884108483049108483234
8851047108484172108484334
10481144108485177108485273
11451335108485972108486162
13361417108499229108499310
14181810108499538108499930

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40057593Full LengthBC111871prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083220  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028944 NP_083220 Q8BG58 2OG-FeII_Oxy

Related Sequences

 
mRNAGenPeptSwissProt
BC111871 AAI11872 Q8BG58
Q2M2M8
AK016685 BAB30379 Q8BG58
AK038927 BAC30172 Q8BG58
AK046783 BAC32866 Q8BG58
AK047714 BAC33135 Q8BG58

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus P4htm NP_083220 R.norvegicus P4htm 301008   XP_217285 98
H.sapiens P4HTM 54681 Gene Info NP_808808 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)