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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tpgs1, tubulin polyglutamylase complex subunit 1
Sequence ID:NM_148934
Entrez Gene ID:110012
Ensembl ID:ENSMUSG00000020308

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10 43.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 79669409 - 79675937

NM_148934 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13747913215479132527
37511017913814479138870

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861535Full LengthBC138515gene trap ROSA b-geo 22
8861536Full LengthBC138516gene trap ROSA b-geo 22

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_148934 NP_683736 Q99MS8  

Related Sequences

 
mRNAGenPeptSwissProt
BC138515 AAI38516 B2RRP1
BC138516 AAI38517 B2RRP1
AF303106 AAK15262 Q99MS8
AK153467 BAE32018 Q99MS8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gm16517 NP_683736 R.norvegicus Tpgs1 691093   NP_001103091 97
H.sapiens TPGS1 91978 Gene Info NP_277048 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)