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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Atp6v0e, ATPase, H+ transporting, lysosomal V0 subunit E
Sequence ID:NM_025272
Entrez Gene ID:11974
Ensembl ID:ENSMUSG00000015575

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 26676417 - 26699644

NM_025272 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11832681334026813522
1842312681962226819669
2323612683229926832428
3627962683615626836590

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5374017Full LengthBC024733ATPase, H+ transporting, lysosomal V0 subunit E
5353703IncompleteBC021529ATPase, H+ transporting, lysosomal V0 subunit E

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079548  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025272 NP_079548 Q9CQD8 ATP_synt_H

Related Sequences

 
mRNAGenPeptSwissProt
BC021529 AAH21529 Q8VDL1
BC024733 AAH24733 Q9CQD8
AK007610 BAB25133 Q9CQD8
AK013229 BAB28727 Q9CQD8
AK017760 BAB30911 Q9CQD8
AK030335 BAC26909 Q9CQD8
AK134836 BAE22305 Q9CQD8
AK159669 BAE35273 Q9CQD8
AK168015 BAE40002 Q9CQD8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp6v0e NP_079548 R.norvegicus Atp6v0e1 94170   NP_446030 100
H.sapiens ATP6V0E1 8992 Gene Info NP_003936 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)