Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Prpf19, PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)
Sequence ID:NM_001253843
Entrez Gene ID:28000
Ensembl ID:ENSMUSG00000024735

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19 6.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 10895445 - 10905132

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3591050Full LengthBC004070PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598890  

Protein Infomation

NM_001253843 NP_001240772    
NM_001253844 NP_001240773    
NM_134129 NP_598890 Q99KP6 WD40

Related Sequences

BC004070 AAH04070 Q99KP6
AF251503 AAK49039 Q99KP6
AK047693 BAC33127 Q4ADG5
AK076998 BAC36557 Q99KP6
AK088769 BAC40560 Q99KP6
AB222602 BAE16340 Q4ADG5
AK164681 BAE37873 Q99KP6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Prpf19 NP_598890 R.norvegicus Prpf19 246216   NP_647549 100
H.sapiens PRPF19 27339 Gene Info NP_055317 99
A.gambiae AgaP_AGAP007217 1269914   XP_308568 69
D.melanogaster Prp19 37123   NP_523783 66
C.elegans T10F2.4 175705   NP_498096 53
A.thaliana MAC3B 817897   NP_850206 46
A.thaliana MAC3A 839503   NP_563708 46
N.crassa NCU11357 5847246   XP_001728133 39
S.pombe prp19 2542256   NP_594874 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)