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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cyb5r3, cytochrome b5 reductase 3
Sequence ID:NM_029787
Entrez Gene ID:109754
Ensembl ID:ENSMUSG00000018042

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E|15 45.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 83153497 - 83153671

NM_029787 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3712578298393182985151
125813578298925582989354
135814438299053382990618
144415278299076782990850
152816578299125082991379
165817648299227982992385
176518378299266182992733
183819698299650482996635
197020668300254183002637

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3154531Full LengthBC004760cytochrome b5 reductase 3
4238275Full LengthBC032013cytochrome b5 reductase 3
6404746Full LengthBC043074cytochrome b5 reductase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084063  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_029787 NP_084063 Q9DCN2 EC 1.6.2.2 NAD_binding_1
FAD_binding_6

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC004760 AAH04760 Q9DCN2 EC 1.6.2.2
BC032013 AAH32013 Q9DCN2 EC 1.6.2.2
BC043074 AAH43074 Q9DCN2 EC 1.6.2.2
AF332059 AAK56088 Q9DCN2 EC 1.6.2.2
AF332060 AAK56089 Q9DCN2 EC 1.6.2.2
AK002640 BAB22252 Q9DCN2 EC 1.6.2.2
AK010858 BAB27227 Q9CY59  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cyb5r3 NP_084063 R.norvegicus Cyb5r3 25035   NP_620232 97
H.sapiens CYB5R3 1727 Gene Info NP_001165131 87
A.thaliana NIA1 844112   NP_177899 52
A.thaliana NIA2 840630   NP_174901 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)