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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Chka, choline kinase alpha
Sequence ID:NM_001025566
NM_001271496
NM_013490
NR_073190
Entrez Gene ID:12660
Ensembl ID:ENSMUSG00000024843

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19 3.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 3851913 - 3894367

 Exon Info From UCSC:
NM_001025566
NM_013490

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3582342IncompleteBC004719choline kinase alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038518  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001025566 NP_001020737      
NM_001271496 NP_001258425 O54804 EC 2.7.1.32
EC 2.7.1.82
 
NM_013490 NP_038518     Choline_kinase
APH

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC004719 AAH04719 Q99KD4  
BC056758 AAH56758 O54804 EC 2.7.1.32
EC 2.7.1.82
AB011002 BAA24898 O54804 EC 2.7.1.32
EC 2.7.1.82
AK014174 BAB29191 Q5J2U5
O54804
EC 2.7.1.32
EC 2.7.1.82
AK052056 BAC34841 O54804 EC 2.7.1.32
EC 2.7.1.82
AK053818 BAC35539 O54804 EC 2.7.1.32
EC 2.7.1.82
AK166465 BAE38793 Q3TLJ9  
AK166641 BAE38910 Q3TL82  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chka NP_038518 R.norvegicus Chka 29194   NP_058823 98
H.sapiens CHKA 1119 Gene Info NP_001268 88
P.falciparum PF14_0020 811591   XP_001348193 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)