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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pkp2, plakophilin 2
Sequence ID:NM_026163
Entrez Gene ID:67451
Ensembl ID:ENSMUSG00000041957

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16|16 B1

Chromosomal Position (from UCSC)

Chromosomal Position:16: 16213344 - 16272712

 Exon Info From UCSC:
NM_026163

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861271Full LengthBC138252plakophilin 2
8861272Full LengthBC138253plakophilin 2
4973086IncompleteBC037133plakophilin 2
6436123IncompleteBC068279plakophilin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080439  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026163 NP_080439 Q9CQ73 Arm

Related Sequences

 
mRNAGenPeptSwissProt
BC068279 AAH68279 Q6NV73
BC138252 AAI38253 Q9CQ73
BC138253 AAI38254 Q9CQ73
AK004650 BAB23441 Q9CQ73
AK005020 BAB23749 Q9CQ73
AK049481 BAC33771 Q9CQ73
AK167660 BAE39710 Q3TIY5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pkp2 NP_080439 R.norvegicus Pkp2 287925   NP_001093969 94
H.sapiens PKP2 5318 Gene Info NP_001005242 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)