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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gpc3, Glypican 3
Sequence ID:NM_016697
Entrez Gene ID:14734
Ensembl ID:ENSMUSG00000055653

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X|X A3.3

Chromosomal Position (from UCSC)

Chromosomal Position:X: 52272428 - 52613914

NM_016697 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
75324962560549626130
5336924966801349668172
6938134971889849719018
8149394974128549741410
94010734975024949750382
107417684978161649782310
176919304993597349936134
193122724996680949967150

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4973409Full LengthBC036126glypican 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057906  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016697 NP_057906 Q3TWB2
Q8CFZ4
Glypican

Related Sequences

 
mRNAGenPeptSwissProt
AF185614 AAD56244 Q9QZF1
BC036126 AAH36126 Q3TWB2
Q8CFZ4
AK146702 BAE27369 Q3TWB2
Q8CFZ4
AK159394 BAE35048 Q3TX35
AK159435 BAE35081 Q3TX35
AK159764 BAE35354 Q3TWB2
Q8CFZ4
AK168402 BAE40323 Q3TWB2
Q8CFZ4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gpc3 NP_057906 R.norvegicus Gpc3 25236   NP_036906 99
H.sapiens GPC3 2719 Gene Info NP_004475 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)