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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Arid1a, AT rich interactive domain 1A (SWI-like)
Sequence ID:NM_001080819
Entrez Gene ID:93760
Ensembl ID:ENSMUSG00000007880

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 133679009 - 133723039

 Exon Info From UCSC:
NM_001080819

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30622048Full LengthBC082554AT rich interactive domain 1A (SWI-like)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080819 NP_001074288 A2BH40  

Related Sequences

 
mRNAGenPeptSwissProt
BC028548 AAH28548 Q8R024
BC082554 AAH82554 A2BH40
AF268912 AAK54504 A2BH40
AK048464 BAC33346 Q8C846

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arid1a NP_001074288 R.norvegicus Arid1a 297867   NP_001100105 98
H.sapiens ARID1A 8289 Gene Info NP_006006 97
D.melanogaster osa 42130   NP_996228 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta