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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tsc1, tuberous sclerosis 1
Sequence ID:NM_022887
Entrez Gene ID:64930
Ensembl ID:ENSMUSG00000026812

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 B-C1.1

Chromosomal Position (from UCSC)

Chromosomal Position:2: 28658684 - 28687173

 Exon Info From UCSC:
NM_022887

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5720967Full LengthBC052399tuberous sclerosis 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075025  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022887 NP_075025   Hamartin

Related Sequences

 
mRNAGenPeptSwissProt
BC052399 AAH52399 Q9EP53
AB047561 BAB60810 Q9EP53
AK047656 BAC33114 Q8BQP0
AK122229 BAC65511 Q9EP53
AK147428 BAE27905 Q9EP53
AJ271912 CAC20677 Q9EP53

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tsc1 NP_075025 R.norvegicus Tsc1 60445   NP_068626 96
H.sapiens TSC1 7248 Gene Info NP_000359 88
D.melanogaster Tsc1 42862   NP_477415 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta