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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ptpra, protein tyrosine phosphatase, receptor type, A
Sequence ID:NM_001163688
NM_008980
Entrez Gene ID:19262
Ensembl ID:ENSMUSG00000027303

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 G|2 73.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 130503479 - 130553468

 Exon Info From UCSC:
NM_001163688
NM_008980

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3965311Full LengthBC110683protein tyrosine phosphatase, receptor type, A
6811172Full LengthBC050930protein tyrosine phosphatase, receptor type, A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033006  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001163688 NP_001157160      
NM_008980 NP_033006 P18052 EC 3.1.3.48 Y_phosphatase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M36033 AAA39448 P18052 EC 3.1.3.48
BC050930 AAH50930 Q91V35  
BC110683 AAI10684 Q91V35  
AF332081 AAK56109 Q91V35  
AF332082 AAK56110 Q91V35  
AK031690 BAC27515 Q91V35  
AK162387 BAE36887 Q3TRY9  
Z23054 CAA80589 P18052 EC 3.1.3.48
Z23055 CAA80590 P18052 EC 3.1.3.48
AJ431367 CAD24071 Q91V35  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptpra NP_001157160 R.norvegicus Ptpra 25167   NP_036895 98
H.sapiens PTPRA 5786 Gene Info NP_002827 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta