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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pex5, peroxisomal biogenesis factor 5
Sequence ID:NM_008995
NM_175933
Entrez Gene ID:19305
Ensembl ID:ENSMUSG00000005069

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F2|6 59.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 124396817 - 124415049

 Exon Info From UCSC:
NM_008995
NM_175933

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2599159Full LengthBC029748peroxisomal biogenesis factor 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033021  NP_787947  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008995 NP_033021 O09012 TPR_1
NM_175933 NP_787947   TPR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC029748 AAH29748 O09012
AK088886 BAC40632 O09012
AK145111 BAE26240 O09012
AK145361 BAE26388 O09012
AK161470 BAE36414 O09012
Z97018 CAB09694 O09012
AJ416473 CAC94925 O09012

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pex5 NP_033021 R.norvegicus Pex5 312703   XP_232343 98
H.sapiens PEX5 5830 Gene Info NP_001124498 94
D.melanogaster CG14815 31141   NP_569949 44
A.gambiae AgaP_AGAP006820 1270245   XP_308925 42
C.elegans prx-5 174392   NP_001022019 39
N.crassa NCU02960 3881510   XP_965347 38
A.thaliana PEX5 835728   NP_200440 37
S.cerevisiae PEX5 851831   NP_010530 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)