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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Itgax, integrin alpha X
Sequence ID:NM_021334
Entrez Gene ID:16411
Ensembl ID:ENSMUSG00000030789

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 128129567 - 128150657

 Exon Info From UCSC:
NM_021334

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068125Full LengthBC167225integrin alpha X
40110482IncompleteBC128336integrin alpha X

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067309  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021334 NP_067309 Q9QXH4 VWA
Integrin_alpha
FG-GAP
Integrin_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
AF211864 AAF23492 Q9QXH4
BC057200 AAH57200 Q6PG66
BC167225 AAI67225  
AK089167 BAC40773 Q8C270
AK131133 BAD21383 Q6KAS4
AK155816 BAE33446 Q3U1P9
AK170432 BAE41792 Q3TD13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itgax NP_067309 R.norvegicus Itgax 499271   XP_574569 86
H.sapiens ITGAX 3687 Gene Info NP_000878 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)