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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Kif5b, kinesin family member 5B
Sequence ID:NM_008448
Entrez Gene ID:16573
Ensembl ID:ENSMUSG00000006740

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 A2-B1|18 1.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 6201029 - 6209072

 Exon Info From UCSC:
NM_008448

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30543821Full LengthBC090841kinesin family member 5B
3985895IncompleteBC040800kinesin family member 5B
5025343IncompleteBC025864kinesin family member 5B
6440034IncompleteBC069920kinesin family member 5B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032474  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008448 NP_032474 Q61768 Kinesin

Related Sequences

 
mRNAGenPeptSwissProt
L29223 AAA20132 Q61768
L27153 AAA20133 Q61768
U86090 AAB53940 Q61768
BC025864 AAH25864 Q05CG8
BC040800 AAH40800 Q8CFE7
BC069920 AAH69920 Q6NSS5
BC090841 AAH90841 Q61768
AK014590 BAB29448 Q9CUT6
AK133535 BAE21710 Q3UWI9
AK136307 BAE22926 Q3UWI9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kif5b NP_032474 R.norvegicus Kif5b 117550   NP_476550 99
H.sapiens KIF5B 3799 Gene Info NP_004512 97
A.gambiae AgaP_AGAP000561 1271664   XP_310522 66
D.melanogaster Khc 36810   NP_476590 64
C.elegans unc-116 176179   NP_498842 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)