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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Il1b, interleukin 1 beta
Sequence ID:NM_008361
Entrez Gene ID:16176
Ensembl ID:ENSMUSG00000027398

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F|2 73.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 129364590 - 129371139

NM_008361 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2660129190315129190973
661791129191695129191825
792962129192975129193145
9631164129193692129193893
11651213129195438129195486
12141275129196019129196080
12761328129196803129196855

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3989461Full LengthBC011437interleukin 1 beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032387  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008361 NP_032387 P10749 IL1
IL1_propep

Related Sequences

 
mRNAGenPeptSwissProt
M15131 AAA39276 P10749
BC011437 AAH11437 P10749
AK168047 BAE40029 Q3TI17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Il1b NP_032387 R.norvegicus Il1b 24494   NP_113700 88
H.sapiens IL1B 3553 Gene Info NP_000567 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta