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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r231, vomeronasal 1 receptor 231
Sequence ID:NM_134196
Entrez Gene ID:171230
Ensembl ID:ENSMUSG00000050933

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.2|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 20889190 - 20890720

NM_134196 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19362102667921027614

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015844Full LengthBC148812vomeronasal 1 receptor, E7
100015087BC146391vomeronasal 1 receptor, E7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598957  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134196 NP_598957 Q8R2A3 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC146391 AAI46392  
BC148812 AAI48813  
AF394947 AAM69667 Q8K4I2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r231 NP_598957 R.norvegicus Vom1r10 494302   NP_001008958 72
R.norvegicus Vom1r15 494305   NP_001008960 71
R.norvegicus Vom1r14 494304   NP_001008961 71
R.norvegicus Vom1r12 494306   NP_001008962 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)