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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r228, vomeronasal 1 receptor 228
Sequence ID:NM_134192
Entrez Gene ID:171226
Ensembl ID:ENSMUSG00000060245

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.2|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 20776058 - 20777501

NM_134192 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
214432091302320914464

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062214Full LengthBC156746vomeronasal 1 receptor, E3
40140575IncompleteBC134400vomeronasal 1 receptor, E3
100015488BC148557vomeronasal 1 receptor, E3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598953  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134192 NP_598953 Q8R2A7 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC148557 AAI48558  
BC156746 AAI56747  
AF394950 AAM69670 Q8R2A7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r228 NP_598953 R.norvegicus Vom1r7 494259   NP_001008907 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)