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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smyd3, SET and MYND domain containing 3
Sequence ID:NM_027188
Entrez Gene ID:69726
Ensembl ID:ENSMUSG00000055067

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H3|1 97.59 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 178957258 - 179518034

 Exon Info From UCSC:
NM_027188

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5370924Full LengthBC061485SET and MYND domain containing 3
6837012Full LengthBC052431SET and MYND domain containing 3
3493177IncompleteBC038482SET and MYND domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081464  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_027188 NP_081464 Q9CWR2 EC 2.1.1.43 SET
zf-MYND

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC052431 AAH52431 Q9CWR2 EC 2.1.1.43
BC061485 AAH61485 Q9CWR2 EC 2.1.1.43
AK010447 BAB26947 Q9CWR2 EC 2.1.1.43
AK044168 BAC31804 Q9CWR2 EC 2.1.1.43
AK046829 BAC32887 Q9CWR2 EC 2.1.1.43
AK087728 BAC39984 Q8C2Y2  
AK163057 BAE37175 Q3TR55  
AK167875 BAE39889 Q3TIF7  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smyd3 NP_081464 R.norvegicus Smyd3 498295   NP_001020933 98
H.sapiens SMYD3 64754 Gene Info NP_001161212 94
C.elegans set-18 172949   NP_492772 34
A.gambiae AgaP_AGAP008954 1279922   XP_319707 33
P.falciparum PF13_0293 814257   XP_001350265 33
D.melanogaster Bzd 44554   NP_524768 32
A.thaliana SDG37 816300   NP_849969 30
C.elegans set-30 180772   NP_508850 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)