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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ipo5, importin 5
Sequence ID:NM_023579
Entrez Gene ID:70572
Ensembl ID:ENSMUSG00000030662

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 E5|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 120911242 - 120947999

 Exon Info From UCSC:
NM_023579

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5719784Full LengthBC052392importin 5
6842146Full LengthBC054814importin 5
4014222IncompleteBC051433importin 5
30464366IncompleteBC066204importin 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076068  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023579 NP_076068 Q8BKC5 HEAT

Related Sequences

 
mRNAGenPeptSwissProt
AF294327 AAG45965 Q8BKC5
BC051433 AAH51433 Q7TN23
BC052392 AAH52392 Q8BKC5
BC054814 AAH54814 Q8BKC5
BC066204 AAH66204 Q6NZC1
AK017701 BAB30883 Q9CYG6
AK053681 BAC35471 Q8BKC5
AK161668 BAE36521 Q3TT04
AK169664 BAE41286 Q8BKC5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ipo5 NP_076068 R.norvegicus Ipo5 306182   XP_224534 99
H.sapiens IPO5 3843 Gene Info NP_002262 98
A.gambiae AgaP_AGAP003769 1271502   XP_310308 53
D.melanogaster Karybeta3 40581   NP_524226 53
A.thaliana emb2734 832102   NP_197483 39
S.pombe sal3 2539387   NP_588502 37
C.elegans imb-3 3565440   NP_490715 37
N.crassa NCU02357 3875925   XP_959778 37
S.cerevisiae PSE1 855356   NP_014039 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)